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Predicting conversion from MCI to AD using resting-state fMRI, graph theoretical approach and SVM
Hojjati SH, Ebrahimzadeh A, Khazaee A, Babajani-Feremi A, Alzheimer’s Disease Neuroimaging Initiative.. Journal of neuroscience methods, 2017-03-09
Topic: Brain imaging, connectivity and assessment
Background We investigated identifying patients with mild cognitive impairment (MCI) who progress to Alzheimer's disease (AD), MCI converter (MCI-C), from those with MCI who do not progress to AD, MCI non-converter (MCI-NC), based on resting-state fMRI (rs-fMRI). New method Graph theory and machine learning approach were utilized to predict progress of patients with MCI to AD using rs-fMRI. Eighteen MCI converts (average age 73.6 years; 11 male) and 62 age-matched MCI non-converters (average age 73.0 years, 28 male) were included in this study. We trained and tested a support vector machine (SVM) to classify MCI-C from MCI-NC using features constructed based on the local and global graph measures. A novel feature selection algorithm was developed and utilized to select an optimal subset of features. Results Using subset of optimal features in SVM, we classified MCI-C from MCI-NC with an accuracy, sensitivity, specificity, and the area under the receiver operating characteristic (ROC) curve of 91.4%, 83.24%, 90.1%, and 0.95, respectively. Furthermore, results of our statistical analyses were used to identify the affected brain regions in AD. Comparison with existing method(s) To the best of our knowledge, this is the first study that combines the graph measures (constructed based on rs-fMRI) with machine learning approach and accurately classify MCI-C from MCI-NC. Conclusion Results of this study demonstrate potential of the proposed approach for early AD diagnosis and demonstrate capability of rs-fMRI to predict conversion from MCI to AD by identifying affected brain regions underlying this conversion.
Key findings
- Results Using subset of optimal features in SVM, we classified MCI-C from MCI-NC with an accuracy, sensitivity, specificity, and the area under the receiver operating characteristic (ROC) curve of 91.4%, 83.24%, 90.1%, and 0.95, respectively.
- Furthermore, results of our statistical analyses were used to identify the affected brain regions in AD.
- Conclusion Results of this study demonstrate potential of the proposed approach for early AD diagnosis and demonstrate capability of rs-fMRI to predict conversion from MCI to AD by identifying affected brain regions underlying this conversion.
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Study details
- Effect size91.4%; 83.24%; 90.1%
- Evidence strengthLow
How this study scored 41/100
Published in a peer-reviewed journal. Scored zero for study design, sample size, studied in people and randomised / blinded because the record does not state it. We have no data on journal's citation record, times cited, citations per year, impact for its field and year, cited by studies here, still being cited, senior author's track record, institution's track record and multi-centre collaboration, so those were left out: it earned 24 of the 58 points we could judge it on, which is 41 out of 100.
| Component | Points | Why |
|---|---|---|
| Journal tier | 7 / 10 | Tier 3 — peer-reviewed journal (Journal of neuroscience methods) |
| Journal's citation record | — / 4 | No journal record from OpenAlex — left out of this score |
| Study design | 0 / 12 | No study design recorded — scores zero, not guessed (not stated in the record — scored 0) |
| Strength of evidence | 1 / 5 | Rated “low” in our summary |
| Peer-review validation | 10 / 10 | Peer-reviewed. Published as an article in a named peer-reviewed journal. |
| How recent | 2 / 5 | 2017 — within 10 year(s) of the newest study here |
| Sample size | 0 / 4 | Participant count not stated — scores zero (not stated in the record — scored 0) |
| Effect reported | 2 / 3 | Effect reported as a number, without an interval or test |
| Studied in people | 0 / 3 | Not stated whether this was studied in people — scores zero (not stated in the record — scored 0) |
| Randomised / blinded | 0 / 2 | No randomisation or blinding stated — scores zero (not stated in the record — scored 0) |
| Times cited | — / 7 | No citation count (not found in OpenAlex) — left out of this score |
| Citations per year | — / 5 | No citation count or no year — left out of this score |
| Impact for its field and year | — / 6 | No field-weighted citation impact (OpenAlex has none yet) — left out of this score |
| Cited by studies here | — / 6 | Not yet checked against this library's citation graph — left out of this score |
| Still being cited | — / 4 | No yearly citation counts — left out of this score |
| Senior author's track record | — / 4 | Senior author's record not available — left out of this score |
| Institution's track record | — / 3 | No institution listed in OpenAlex — left out of this score |
| Multi-centre collaboration | — / 3 | Institutions not listed — left out of this score |
| Indexed in PubMed | 2 / 2 | Indexed in PubMed (PMID 28286064) |
| Free to read | 0 / 2 | Behind a paywall — scores zero |
| Points | 24 / 58 | Scored on 11 of 20 parts. We have no data for the rest, so they are left out: 24 of the 58 points we could judge it on is 41 out of 100. |
| Total | 41 / 100 | — |
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APA 7th
Hojjati, S. H., Ebrahimzadeh, A., Khazaee, A., Babajani-Feremi, A., & Alzheimer’s Disease Neuroimaging Initiative. (2017). Predicting conversion from MCI to AD using resting-state fMRI, graph theoretical approach and SVM. Journal of neuroscience methods. https://doi.org/10.1016/j.jneumeth.2017.03.006
Vancouver
Hojjati SH, Ebrahimzadeh A, Khazaee A, Babajani-Feremi A, Alzheimer’s Disease Neuroimaging Initiative. Predicting conversion from MCI to AD using resting-state fMRI, graph theoretical approach and SVM. Journal of neuroscience methods. 2017. doi:10.1016/j.jneumeth.2017.03.006. PMID: 28286064.
BibTeX
@article{hojjati2017-28286064,
author = {Hojjati, S. H. and Ebrahimzadeh, A. and Khazaee, A. and Babajani-Feremi, A. and {Alzheimer’s Disease Neuroimaging Initiative}},
title = {{Predicting conversion from MCI to AD using resting-state fMRI, graph theoretical approach and SVM}},
journal = {Journal of neuroscience methods},
year = {2017},
doi = {10.1016/j.jneumeth.2017.03.006},
pmid = {28286064},
url = {https://doi.org/10.1016/j.jneumeth.2017.03.006}
}
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